analyzeLocalCorrelationsModules: Compute local correlations for all modules

In YosefLab/FastProjectR: Functional interpretation of single cell RNA-seq latent manifolds

Compute local correlations for all modules

Description

This is the main analysis function. For each filtered dataset, a set of different projection onto low-dimensional space are computed, and the consistency of the resulting space with the signature scores is computed to find signals that are captured successfully by the projections.

Usage

analyzeLocalCorrelationsModules(object, tree = FALSE)

Arguments

object	the VISION object
tree	whether to use the tree object as latent space for neighbors

Value

the VISION object with values set for the analysis results

YosefLab/FastProjectR documentation built on June 13, 2024, 4:20 p.m.