computeKNNWeights-Trajectory-method: Compute KNN weights based on geodesic distances for...
In YosefLab/FastProjectR: Functional interpretation of single cell RNA-seq latent manifolds
computeKNNWeights,Trajectory-method R Documentation
Compute KNN weights based on geodesic distances for Trajectory objects
Description
Compute KNN weights based on geodesic distances for Trajectory objects
Usage
## S4 method for signature 'Trajectory'
computeKNNWeights(object, K = round(sqrt(nrow(object))))
Arguments
object
a Trajectory object
K
Number of neighbors to consider.
Value
a list of two items:
indices: matrix, cells X neighbors
Each row specifies indices of nearest neighbors
weights: matrix, cells X neighbors
Corresponding weights to nearest neighbors
YosefLab/FastProjectR documentation built on June 13, 2024, 4:20 p.m.
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| computeKNNWeights,Trajectory-method | R Documentation |
Compute KNN weights based on geodesic distances for Trajectory objects
Description
Compute KNN weights based on geodesic distances for Trajectory objects
Usage
## S4 method for signature 'Trajectory'
computeKNNWeights(object, K = round(sqrt(nrow(object))))
Arguments
object |
a Trajectory object |
K |
Number of neighbors to consider. |
Value
a list of two items: indices: matrix, cells X neighbors Each row specifies indices of nearest neighbors weights: matrix, cells X neighbors Corresponding weights to nearest neighbors
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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