as.phyloseq: convert to phyloseq object.
In YuLab-SMU/MicrobiotaProcess: A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework
View source: R/method-as-phyloseq.R
as.phyloseq R Documentation
convert to phyloseq object.
Description
convert to phyloseq object.
Usage
as.phyloseq(x, .abundance, ...)
as_phyloseq(x, .abundance, ...)
## S3 method for class 'MPSE'
as.phyloseq(x, .abundance, ...)
## S3 method for class 'tbl_mpse'
as.phyloseq(x, .abundance, ...)
Arguments
x
object, tbl_mpse object, which the result of
as_tibble for phyloseq objcet.
.abundance
the column name to be as the abundance
of otu table, default is Abundance.
...
additional params
Value
phyloseq object.
YuLab-SMU/MicrobiotaProcess documentation built on Nov. 8, 2024, 4:37 p.m.
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View source: R/method-as-phyloseq.R
| as.phyloseq | R Documentation |
convert to phyloseq object.
Description
convert to phyloseq object.
Usage
as.phyloseq(x, .abundance, ...)
as_phyloseq(x, .abundance, ...)
## S3 method for class 'MPSE'
as.phyloseq(x, .abundance, ...)
## S3 method for class 'tbl_mpse'
as.phyloseq(x, .abundance, ...)
Arguments
x |
object, tbl_mpse object, which the result of as_tibble for phyloseq objcet. |
.abundance |
the column name to be as the abundance of otu table, default is Abundance. |
... |
additional params |
Value
phyloseq object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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