readSSfile: readSSfile
In YuLab-SMU/ggmsa: Plot Multiple Sequence Alignment using 'ggplot2'
readSSfile R Documentation
readSSfile
Description
Read secondary structure file
Usage
readSSfile(file, type = NULL)
Arguments
file
A text file in connect format
type
file type. one of "Helix, "Connect", "Vienna" and "Bpseq"
Value
data frame
Author(s)
Lang Zhou
Examples
RF03120 <- system.file("extdata/Rfam/RF03120_SS.txt", package="ggmsa")
helix_data <- readSSfile(RF03120, type = "Vienna")
YuLab-SMU/ggmsa documentation built on Aug. 26, 2022, 1:48 a.m.
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| readSSfile | R Documentation |
readSSfile
Description
Read secondary structure file
Usage
readSSfile(file, type = NULL)
Arguments
file |
A text file in connect format |
type |
file type. one of "Helix, "Connect", "Vienna" and "Bpseq" |
Value
data frame
Author(s)
Lang Zhou
Examples
RF03120 <- system.file("extdata/Rfam/RF03120_SS.txt", package="ggmsa")
helix_data <- readSSfile(RF03120, type = "Vienna")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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