heatmapDirection: Plot the directionality results in a heatmap.

In aGutierrezSacristan/comorbidity: Analyze comorbidities from electronic health record data

Description

Given an dataframe with the directionality results obtained after apply the directionality function, a heatmap plot of the results is obtained.

Usage

heatmapDirection(input, interactive = FALSE,
  fromAtoBColor = "darkgreen", fromBtoAColor = "orange",
  noDirectionColor = "grey", verbose = FALSE)

Arguments

input	A data.frame obtained after applying the directionality function
interactive	Determines if the output heatmap is interactive or not. By default the interactive argument is set up as FALSE. The value of the argument can be changed to TRUE, as a result an interactive heatmap will be obtained.
fromAtoBColor	Determines the heatmap color for the direction A to B. By default it is set to "olivegreen".
fromBtoAColor	Determines the heatmap color for the direction B to A. By default it is set to "orange".
noDirectionColor	Determines the heatmap color when there is no preferred direction. By default it is set to "grey".
verbose	By default FALSE. Change it to TRUE to get a on-time log from the function.
warnings	By default TRUE. Change it to FALSE to don't see the warnings.

Value

A heatmap

Examples

load(system.file("extdata", "directionalityExample.RData", package="comoRbidity"))
htmpDirection <- heatmapDirection( input            = directionalityEx, 
                                   fromAtoBColor    = "darkgreen", 
                                   fromBtoAColor    = "orange", 
                                   noDirectionColor = "grey")
htmpDirection

aGutierrezSacristan/comorbidity documentation built on April 10, 2020, 5:54 p.m.