R/data.r

#' Human Microbiome Project Metagenome Taxonomic Profiles
#'
#' Profiles of 51 vaginal metagenomic samples from the Human Microbiome Project and analyzed using MetaPhlan2.
#'
#' @format A dataset with variables
#' \describe{
#' \item{taxa}{species-level clade assigned by MetaPhlan2}
#' \item{sample}{Sequenced body site}
#' \item{abundance}{relative abundance of detected microbe}
#' }
#'
#' @source \url{http://huttenhower.sph.harvard.edu/metaphlan}
"profiles"
aaronwolen/metafiler documentation built on Feb. 16, 2024, 12:41 a.m.