base: Base methods

In acidgenomics/DESeqAnalysis: Acid Genomics DESeq2 Analysis Utilities

Base methods

Description

Base methods

Usage

## S4 method for signature 'DESeqAnalysis'
colnames(x, do.NULL = TRUE, prefix = "col")

## S4 method for signature 'DESeqAnalysis'
dim(x)

## S4 method for signature 'DESeqAnalysis'
dimnames(x)

## S4 method for signature 'DESeqAnalysis'
names(x)

## S4 method for signature 'DESeqAnalysis'
rownames(x, do.NULL = TRUE, prefix = "row")

Arguments

x	Object.
do.NULL	logical. If FALSE and names are NULL, names are created.
prefix	for created names.

Value

Varies, dependending on function.

Note

Updated 2022-05-17.

Examples

data(deseq)

head(colnames(deseq))
head(rownames(deseq))

head(names(deseq))

lapply(X = dimnames(deseq), FUN = head)

acidgenomics/DESeqAnalysis documentation built on June 13, 2025, 10:35 a.m.