plotDegUpset: UpSet plot of directional DEG intersections across contrasts

In acidgenomics/DESeqAnalysis: Acid Genomics DESeq2 Analysis Utilities

UpSet plot of directional DEG intersections across contrasts

Description

UpSet plot of directional DEG intersections across contrasts

Usage

plotDegUpset(object, ...)

## S4 method for signature 'DESeqAnalysis'
plotDegUpset(object, i = NULL, direction = c("both", "up", "down"), ...)

Arguments

object	Object.
i	character, numeric, or NULL. Names or range of results. If set NULL, include all results.
direction	character(1). Include "both", "up", or "down" directions.
...	Passthrough arguments to AcidPlots::plotUpset().

Value

Plot.

Note

Updated 2022-05-18.

Examples

data(deseq)

## DESeqAnalysis ====
plotDegUpset(deseq)

acidgenomics/DESeqAnalysis documentation built on March 27, 2024, 10:32 p.m.