Man pages for acidgenomics/minimalism
Functions for plotting genomic data

acid_coord_flipFlip coordinates
acidplots-packageacidplots Functions for plotting genomic data.
acidplotsTestsURLacidplots test data URL
acid_pretty_breaksPretty breaks that resemble the base plotting engine
acid_scale_y_continuous_nopadRemove Y axis padding
barcodeRanksPerSampleBarcode ranks per sample
defunctDefunct functions
deprecatedDeprecated functions
genderMarkersSexually dimorphic gender marker genes
geomsggplot2 geometric objects
gradientHex color gradient generator
isDarkShould the plot labels be rendered in dark mode?
matchLabelsMatch ggplot2 labels
palettesColor palettes
plotBarcodeRanksPlot barcode ranks
plotCellCountsPlot cell counts
plotCorrelationHeatmapCorrelation heatmap
plotCountsPlot counts
plotCountsCorrelationPlot counts correlation
plotCountsCorrelationHeatmapPlot counts correlation heatmap
plotCountsPerBiotypePlot counts per biotype
plotCountsPerBroadClassPlot counts per broad class definition
plotCountsPerCellPlot counts per cell
plotCountsPerFeaturePlot counts per feature
plotCountsVsFeaturesPlot count and feature correlation
plotFeaturesDetectedPlot features detected
plotFeaturesPerCellPlot features per cell
plotGenderMarkersPlot sexually dimorphic gender marker genes
plotHeatmapHeatmap
plotMitoRatioPlot mitochondrial transcript abundance
plotMitoVsCodingPlot mitochondrial vs. coding counts
plotNoveltyPlot novelty score
plotPCAPrincipal component analysis plot
plotQCQuality control
plotQuantileHeatmapQuantile heatmap
plotSumsPlot row or column sums
plotTotalCountsPlot total read counts
plotUpsetUpSet plot
plotZerosVsDepthPlot percentage of zeros vs. library depth
reexportsObjects exported from other packages
synesthesiaSynesthesia color palette
themesggplot2 themes
acidgenomics/minimalism documentation built on Jan. 25, 2020, 1:56 a.m.