ablandscape.delta.fit: Fitting an antibody delta landscape

In acorg/ablandscapes: Making Antibody landscapes Using R

Fitting an antibody delta landscape

Description

Fit an antibody landscape that represents the difference in reactivity between two serum samples on a log scale.

Usage

ablandscape.delta.fit(
  titers1,
  titers2,
  coords,
  bandwidth,
  degree,
  error.sd,
  control = list()
)

Arguments

titers1	A vector of titers against each antigen.
titers2	A vector of titers against each antigen.
coords	A matrix of the antigen coordinates of each antigen.
bandwidth	The bandwidth of the local regression.
degree	The degree of the polynomials to be used, normally 1 or 2.
control	Control parameters: see (ablandscape.control)

acorg/ablandscapes documentation built on March 4, 2024, 7:50 a.m.