lndscp_r3jsplot: View method for the antibody landscape object

In acorg/ablandscapes: Making Antibody landscapes Using R

View method for the antibody landscape object

Description

View method for the antibody landscape object

Usage

lndscp_r3jsplot(
  fit,
  xlim = NULL,
  ylim = NULL,
  zlim = NULL,
  padding = 1,
  crop2chull = TRUE,
  output = "widget",
  show.titers = TRUE,
  show.impulses = show.titers,
  show.surface = TRUE,
  show.individual.surfaces = FALSE,
  show.map.antigens = TRUE,
  show.map.sera = TRUE,
  show.axis = TRUE,
  show.sidegrid = TRUE,
  aspect.z = 1,
  rotation = NULL,
  translation = NULL,
  zoom = NULL,
  toggles = TRUE,
  grid_spacing = 0.5,
  titer_proportion_cutoff = 0.9,
  options = list(),
  options.individual.surfaces = list(opacity.surface.grid = 0.4, opacity.surface = 0.2,
    col.surface = "grey70", col.surface.grid = "grey70")
)

Arguments

xlim	The x axis limits
ylim	The y axis limits
zlim	The z axis limits
crop2chull	Should the plot be cropped to the convex hull bounded by the points
object	The antibody landscape object
...	Additional plotting parameters

acorg/ablandscapes documentation built on March 4, 2024, 7:50 a.m.