ablandscape.par: Get defaults for antibody landscape plotting

In acorg/ablandscapes: Making Antibody landscapes Using R

Get defaults for antibody landscape plotting

Description

This function returns all the options that can be set for plotting of antibody landscapes and the default values for them.

Usage

ablandscape.par(
  cex = 1,
  cex.basemap = cex,
  cex.basemap.ags = cex.basemap,
  cex.basemap.sr = cex.basemap,
  cex.titer = cex,
  cex.titer.impulse = cex,
  col.impulse = "grey20",
  lwd.impulse = 0.5,
  lwd.grid = 1,
  lwd.titer.outline = 1,
  asp.z = 1,
  zaxt = "linear",
  col.grid = "grey80",
  col.surface = "grey20",
  col.surface.grid = "grey20",
  shininess.surface = 30,
  sidegrid.lwd = 1,
  sidegrid.col = "grey95",
  sidegrid.at = NULL,
  opacity.basemap = 0.4,
  opacity.basemap.ags = opacity.basemap,
  opacity.basemap.sr = opacity.basemap,
  opacity.surface = 0.8,
  opacity.surface.grid = 0.6
)

Value

Returns a list of default plotting options for making antibody landscapes.

acorg/ablandscapes documentation built on March 4, 2024, 7:50 a.m.