NEWS.md

In adamlilith/enmSdm: Tools for Modeling Niches and Distributions of Species

enmSdm X.X.X 2022- Added parallelization and memory-friendly feature to predictEnmSdm!

enmSdm 0.9.3 2022-05-12 trainMaxNet() can now multi-core!

enmSdm 0.9.2 2022-04-17 extractLarge() is preserves memory much better

enmSdm 0.9.1 2022-04-15 Added function extractLarge() rastWithSquareCells() and squareRastCells() now terra-compatible Fixed bug in predictMaxNet()

enmSdm 0.9.0 2022-03-15 Added function predictMaxNet()

enmSdm 0.8.6 2022-03-15 Fixed bug in predictEnmSdm() when using maxnet()

enmSdm 0.8.5 2022-02-22 Fixed bug in elimCellDups() introduced by fixing bug in xToCoords()!

enmSdm 0.8.4 2022-02-22 Fixed bug in other functions introduced by fixing bug in xToCoords()!

enmSdm 0.8.3 2022-02-17 Fixed bug in xToCoords()

enmSdm 0.8.2 2022-02-14 Fixed help in trainByCrossValid()

enmSdm 0.7.2 2022-01-29 Fixed bug in sampleRast()

enmSdm 0.7.0 2021-12-15 sampleRast() randomly places sites within cells (not just cell centers) trainNs() does not call brglmFit2 by default anymore

enmSdm 0.6.1 2021-12-10 Added createPlotPoly()

enmSdm 0.6.0 2021-11-10 Fixing R CMD check issues

enmSdm 0.5.3.8 2021-10-25 Update for Maxent 3.4.4

enmSdm 0.5.3.6 2021-06-22 Fixed mistake in how Pearson correlation is named in compareNiches() and compareResponse() (was "rho", is now "cor")

enmSdm 0.5.3.5 2021-04-14 Renamed aucMultiWeighted() cases to be more intuitive

enmSdm 0.5.3.5 2021-04-14 Added thresholdMultiWeighted() Better handling of extreme cases in aucMultiWeighted()

enmSdm 0.5.3.4 2021-04-12 Fixed bug in aucMultiWeighted()

enmSdm 0.5.3.3 2021-03-22 Add getEPSG() for returning EPSG codes

enmSdm 0.5.3.2 2021-02-05 Fixed bug in compareResponse() for areal calculations

enmSdm 0.5.3.1 2021-02-01 Fixed runtime bug in bioticVelocity()

enmSdm 0.5.3.0 2020-11-24 Fixed error in compareNiches() and bioticVelocity() related to calculating Hellinger's I (noted in Erratum to Warren et al. 2008--thank you, João Carlos!)

enmSdm 0.5.2.9 2020-10-20 bioticVelocity() better estimates quantile velocities. bioticVelocity() speed improvements, including multi-core.

enmSdm 0.5.2.8 2020-10-12 trainGlm() now catches cases when no viable models are returned.

enmSdm 0.5.2.7 2020-10-05 Added new methods and a fail-safe to interpolateRasters()

enmSdm 0.5.2.6 2020-10-03 Updated bioticVelocity() to use rasters, rather than arrays

enmSdm 0.5.2.4 2020-09-29 Fixed bug in interpolateRasters() when only one output raster is being interpolated

enmSdm 0.5.2.3 2020-09-24 Cell-weighted calculation of quantile lat/long in bioticVelocity()

enmSdm 0.5.2.3 2020-09-23 Remove ability bioticVelocity() to use "pophist" objects New, straightforward examples in bioticVelocity() Fixed "quant" and "Quants" velocities in bioticVelocity()

enmSdm 0.5.2.2 Graceful catch of non-converged/insufficient models in trainBrt() Sensical names in output of bioticVelocity()

enmSdm 0.5.2.1 Consistent output across models for summaryByCrossValid() Clarified help for bioticVelocity()

enmSdm 0.5.2.0 trainNs() can now return a list of all models trainNs() now cycles through degrees of freedom Can now use natural splines (trainNS()) with cross validation functions Fixed issues with trainByCrossValid()

enmSdm 0.5.1.9 enmSdm 0.5.1.8 Create rastWithSquareCells() Fix squareRasterCells(); renamed to squareRastCells() Remove export of localSpatialCorrForValues() because of instability issue

enmSdm 0.5.1.7 Add squareRasterCells()

enmSdm 0.5.1.6 coordPrecision() handles coordinates in DMS format

enmSdm 0.5.1.5 Add Robinson projection to getCRS()

enmSdm 0.5.1.3 Recompiled for R 4.0.0

enmSdm 0.5.1.2 trainBrt() parallelized trainMaxEnt() parallelized

enmSdm 0.5.0.4 trainByCrossValid() handles non-converged models

enmSdm 0.5.0.3 bioticVelocity() can correct for non-shared land mass Fix bug in getCRS()

enmSdm 0.5.0.2 Fix bug in bioticVelocity()

enmSdm 0.5.0.1 Fix bug in spatialCorrForValues()

enmSdm 0.5.0.0 Fix bug in predictMaxEnt()

enmSdm 0.4.0.5 trainMaxEnt() and trainMaxNet() internals harmonized Made sensible examples for trainXYZ() functions

enmSdm 0.4.0.3 Added function makeCRS() for making custom coordinate reference systems

enmSdm 0.4.0.2 Added function decimalToDms() for converting decimal coordinates to degrees-minutes-seconds format Fixed bug in spatialCorrForPoints() when supplying distance bins in km

enmSdm 0.4.0.1 Fixed bug in coordPrecision() when supplied value was NA.

enmSdm 0.4.0.0 Fixed bug in elimCellDups() when there were no cell duplicates.

adamlilith/enmSdm documentation built on Jan. 6, 2023, 11 a.m.