plotSamplePeaks-proFIAset-method: Plot the sample peak of a proFIAset object.

In adelabriere/proFIA: Preprocessing of FIA-HRMS data

Description

Plot the sample peaks determined by regression for each sample. If you want to check the various regression performed by proFIA in an individual sample we recommend you to use the getInjectionPeak. A sample peak highly different form the other may indicate a problem of the regression process, or an injection issue in the acquisition.

Usage

## S4 method for signature 'proFIAset'
plotSamplePeaks(object, subsample = NULL,
  diagPlotL = FALSE, ...)

Arguments

object	A proFIAset object.
subsample	The subset of sample on which the sample may be plotted. If it is numeric it will be viewed as sample row in the classes table, if it is a character it will be viewed as a factor.
diagPlotL	Boolean used by the usmmary plot function. Keep to FALSE in the general case.
...	SUpplementary arguments which will be passed to the lines function.

Value

No value returned.

Examples

if(require(plasFIA)){
    data(plasSet)
    plotSamplePeaks(plasSet)
}

adelabriere/proFIA documentation built on July 12, 2019, 5:46 a.m.