exportExpressionSet-proFIAset-method: Export proFIAset to ExpressionSet

In adelabriere/proFIA: Preprocessing of FIA-HRMS data

Description

Eport the data from a proFIAset object as an ExpressionSet object from the Biobase package package.

Usage

## S4 method for signature 'proFIAset'
exportExpressionSet(object, colgroup = c("mzMed",
  "scanMin", "scanMax", "nPeaks", "corSampPeakMean",
  "signalOverSolventRatioMean", "timeShifted", "signalOverSolventPvalueMean"))

Arguments

object	A proFIAset object.
colgroup	Labels corresponding to the column names of the group table.

Value

An ExpressionSet object from the Biobase package

Examples

if(require("plasFIA")&require("Biobase")){
    data(plasSet)
    eset<-exportExpressionSet(plasSet)
    eset
}

adelabriere/proFIA documentation built on July 12, 2019, 5:46 a.m.