inst/examples/example_geneSet_methods.R
In aertslab/AUCell: AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
library(GSEABase)
genes_1 <- GeneSet(paste("Gene", 1:20, sep=""), setName="geneSet1")
genes_2 <- GeneSet(paste("Gene", 18:22, sep=""), setName="geneSet2")
geneSets <- GeneSetCollection(genes_1, genes_2)
nGenes(genes_1)
nGenes(geneSets)
subsetGeneSets(geneSets, paste("Gene", 15:20, sep=""))
geneSets_newNames <- setGeneSetNames(geneSets, c("one", "two"))
names(geneSets_newNames)
aertslab/AUCell documentation built on March 12, 2024, 11:40 p.m.
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library(GSEABase)
genes_1 <- GeneSet(paste("Gene", 1:20, sep=""), setName="geneSet1")
genes_2 <- GeneSet(paste("Gene", 18:22, sep=""), setName="geneSet2")
geneSets <- GeneSetCollection(genes_1, genes_2)
nGenes(genes_1)
nGenes(geneSets)
subsetGeneSets(geneSets, paste("Gene", 15:20, sep=""))
geneSets_newNames <- setGeneSetNames(geneSets, c("one", "two"))
names(geneSets_newNames)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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