read.gpml: parse Wikipathways gpml file to a list format
In afukushima/MSEAp: Metabolite Set Enrichment Analysis (MSEA)
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This function parses wikipathways gpml file to a list format
for enrichment analysis.
Usage
1
Arguments
file
*.gpml file
minnum
The minimal # of metabolites that should consider (Default 5).
Value
list
Author(s)
Kozo Nishida
Examples
1
2
3
file <- system.file('extdata',
'At_AtMetExpress_overview_WP3622_89229.gpml', package = 'MSEAp')
wikip <- read.gpml(file)
afukushima/MSEAp documentation built on Sept. 18, 2019, 7:12 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This function parses wikipathways gpml file to a list format for enrichment analysis.
Usage
1 |
Arguments
file |
*.gpml file |
minnum |
The minimal # of metabolites that should consider (Default 5). |
Value
list
Author(s)
Kozo Nishida
Examples
1 2 3 | file <- system.file('extdata',
'At_AtMetExpress_overview_WP3622_89229.gpml', package = 'MSEAp')
wikip <- read.gpml(file)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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