aiminy/ModifiedDOSE: Disease Ontology Semantic and Enrichment analysis
Version 3.1.0

This package implements five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for measuring semantic similarities among DO terms and gene products. Enrichment analyses including hypergeometric model and gene set enrichment analysis are also implemented for discovering disease associations of high-throughput biological data.

Getting started

Package details

AuthorGuangchuang Yu <[email protected]> with contributions from Li-Gen Wang, Vladislav Petyuk and Giovanni Dall'Olio.
Bioconductor views Annotation GeneSetEnrichment MultipleComparison Pathways Software Visualization
MaintainerGuangchuang Yu <[email protected]>
LicenseArtistic-2.0
Version3.1.0
URL https://guangchuangyu.github.io/DOSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("aiminy/ModifiedDOSE")
aiminy/ModifiedDOSE documentation built on June 3, 2017, 2:51 p.m.