geneSim: geneSim
In aiminy/ModifiedDOSE: Disease Ontology Semantic and Enrichment analysis
Description
Usage
Arguments
Details
Value
Author(s)
Description
measuring similarities bewteen two gene vectors.
Usage
1
Arguments
geneID1
entrez gene vector
geneID2
entrez gene vector
measure
one of "Wang", "Resnik", "Rel", "Jiang", and "Lin".
combine
One of "max", "average", "rcmax", "BMA" methods, for combining semantic similarity scores of multiple DO terms associated with gene/protein.
Details
provide two entrez gene vectors, this function will calculate their similarity.
Value
score matrix
Author(s)
Guangchuang Yu http://ygc.name
aiminy/ModifiedDOSE documentation built on May 10, 2019, 7:36 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s)
Description
measuring similarities bewteen two gene vectors.
Usage
1 |
Arguments
geneID1 |
entrez gene vector |
geneID2 |
entrez gene vector |
measure |
one of "Wang", "Resnik", "Rel", "Jiang", and "Lin". |
combine |
One of "max", "average", "rcmax", "BMA" methods, for combining semantic similarity scores of multiple DO terms associated with gene/protein. |
Details
provide two entrez gene vectors, this function will calculate their similarity.
Value
score matrix
Author(s)
Guangchuang Yu http://ygc.name
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.