# ` updateEntityAttributes - Update entity attributes
#'
#' \code{updateEntityAttributes} Update entity assoications.
#'
#' @param coreApi coreApi object with valid jsessionid
#' @param entityType entity type to get
#' @param barcode barcode of entity to get
#' @param updateValues vaules to update as list of value pairs
#' @param useVerbose TRUE or FALSE to indicate if verbose options should be used in http
#' @return returns a list $entity contains entity information, $response contains the entire http response
#' @export
#' @examples
#' \dontrun{
#' api <- coreAPI("PATH TO JSON FILE")
#' login <- authBasic(api)
#' updateValues <- list(SOURCE_LAB = "My Lab", REQUESTOR = "you")
#' response <- updateEntityAttributes(login$coreApi, "entityType", "barcode", updateValues)
#' updatedEntity <- response$entity
#' logOut(login$coreApi)
#' }
#' @author Craig Parman info@ngsanalytics.com
#' @author Adam Wheeler adam.wheeler@thermofisher.com
#' @description \code{updateEntityAttributes} Update entity attributes.
updateEntityAttributes <-
function(coreApi,
entityType,
barcode,
updateValues,
useVerbose = FALSE) {
query <- paste0("('", barcode, "')")
# Get entityType
entity <-
getEntityByBarcode(coreApi,
entityType,
barcode,
fullMetadata = FALSE,
useVerbose = TRUE
)
old_values <- entity$entity
# check to see if all values to update are in the entity
# replace values
if (table(names(updateValues) %in% names(old_values))["TRUE"] != length(names(updateValues))) {
stop({
print("Names of values to update don't match entity names ")
print(names(updateValues))
print(names(old_values))
},
call. = FALSE
)
}
namesToUpdate <- names(updateValues)
for (i in 1:length(namesToUpdate))
{
old_values[[namesToUpdate[i]]] <- updateValues[[i]]
}
body <- old_values
query <- paste0("('", barcode, "')")
header <- c("Content-Type" = "application/json", "If-Match" = "*")
# update record
response <-
apiPUT(
coreApi,
resource = entityType,
query = query,
body = body,
encode = "raw",
headers = header,
useVerbose = useVerbose
)
list(entity = httr::content(response), response = response)
}
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