neuprint_simple_connectivity: Get a list of connected partners for a neuron

In alexanderbates/neuprintr: R client utilities for interacting with the neuPrint connectome analysis service

Description

Get all of the neurons in the database that connect to the query neurons, either upstream or downstream of them

Usage

neuprint_simple_connectivity(bodyids, prepost = c("PRE", "POST"),
  dataset = NULL, conn = NULL, ...)

Arguments

bodyids	the cypher by which to make your search
prepost	whether to look for partners presynaptic to postsynaptic to the given bodyids
dataset	optional, a dataset you want to query. If NULL, the default specified by your R environ file is used. See neuprint_login for details.
conn	optional, a neuprintr connection object, which also specifies the neuPrint server see neuprint_login. If NULL, your defaults set in your R.profile or R.environ are used.
...	methods passed to neuprint_login

Value

a n x m matrix where n correspond to the neurons that connect to m bodyids

See Also

neuprint_common_connectivity, neuprint_get_adjacency_matrix

alexanderbates/neuprintr documentation built on May 28, 2019, 6:11 p.m.