API for alexandruioanvoda/gwascelltyper
Fast GWAS Enrichment Testing
| Global functions | |
|---|---|
| all_hgnc_wtEntrez | Man page |
| bin_specificity_into_quantiles | Man page Source code |
| compute_LDSC_enrichment_discrete | Man page Source code |
| compute_LDSC_enrichment_discrete_optimized | Man page Source code |
| compute_MAGMA_enrichment_discrete | Man page Source code |
| compute_MAGMA_enrichment_linear | Man page Source code |
| compute_SNPSEA_enrichment_discrete | Man page Source code |
| compute_SNPSEA_enrichment_linear | Man page Source code |
| compute_bjk_enrichment_discrete | Man page Source code |
| compute_ewce_scores_environ | Man page Source code |
| compute_ewce_selection_environ | Man page Source code |
| compute_t_stat_matrix_environ | Man page Source code |
| compute_t_stat_scores_environ | Man page Source code |
| compute_t_stat_selection_environ | Man page Source code |
| dep_path | Man page Source code |
| download_dependencies | Man page Source code |
| exp_environ_missingness | Man page Source code |
| finalStep_bjk_joint_test | Man page Source code |
| find_magma_version | Man page Source code |
| format_celltype_names | Man page Source code |
| gene_object_renamer | Man page Source code |
| generate_celltype_data_environ | Man page Source code |
| get_genomebuild_for_sumstats | Man page |
| get_magma_paths | Man page |
| get_os | Man page Source code |
| gwascelltyper | Man page |
| make_geneset_from_score_matrix | Man page Source code |
| map_SNPs_to_genes_for_MAGMA | Man page |
| matrix_missingness | Man page Source code |
| munge_sumstats_for_LDSC_from_MAGMA | Man page Source code |
| munge_sumstats_for_MAGMA | Man page Source code |
| munge_sumstats_for_SNPSEA_from_MAGMA | Man page Source code |
| range01 | Man page Source code |
| read_exp_and_annot_environ | Man page Source code |
| sanity_check_for_exp_and_annot_environ | Man page Source code |
| snp_loc | Man page |
| standard_sumstats_column_headers | Man page |
