getPileUp: getPileUp
In alexjgriffith/CCCA: Cross Condition ChIP Analyisis
Description
A minimal wrapper for the pileup function from hg19Height.c
returns a integer vector of computed read pileups
Usage
1
Arguments
file
The raw data file of interest
bed
The preloaded bed infromation including bed$start and bed$end
chroms
a list of chromosomes whos string values have been repalced with ranks
peakLength
The length of the bed data provided
alexjgriffith/CCCA documentation built on May 10, 2019, 8:52 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
A minimal wrapper for the pileup function from hg19Height.c returns a integer vector of computed read pileups
Usage
1 |
Arguments
file |
The raw data file of interest |
bed |
The preloaded bed infromation including bed$start and bed$end |
chroms |
a list of chromosomes whos string values have been repalced with ranks |
peakLength |
The length of the bed data provided |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.