Description Usage Arguments Value
Query using p-values to choose number of genes
1 2 3 4 5 6 | query_pval_ngenes(
dprimes,
drug_info,
pvals,
breaks = c(seq(0.01, 0.3, 0.01), seq(0.3, 1, 0.05))
)
|
dprimes |
List with names of signatures to query with. Each item of list is named a numeric vector of effect size values with names corresponding to the gene. |
drug_info |
Matrix of differential expression values to query against. Row names are genes and column names are signatures. |
pvals |
Same as |
breaks |
Breaks to use for determing |
Named list with items:
resl |
For each value of |
ngenes |
For each value of |
@seealso query_drugs
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