API for alice-szeliga/keles-pipeline
A Model to Predict Regulatory and Expression Modulating eQTLs
| Global functions | |
|---|---|
| CheckEscoresCol | Man page |
| CreateEscores | Man page |
| GetSubseqCoordAbs | Man page |
| addAllToScoreList | Man page |
| addToScoreList | Man page |
| constructSummary8merScores | Man page |
| construct_overlapping_encodepeaks | Man page |
| createAllCorrelations | Man page |
| createEnrscoresList | Man page |
| createOutput | Man page |
| createSubseq21List | Man page |
| create_fimo_predictors | Man page |
| deepbindAnalysis | Man page |
| dt2granges | Man page |
| dt2uniquegranges | Man page |
| encodeAnalysis | Man page |
| extract8mers | Man page |
| extract_encodepeaks | Man page |
| factorBookAnalysis | Man page |
| getAllLists | Man page |
| getBedDF | Man page |
| getBedList | Man page |
| getBedNames | Man page |
| getCols3to5 | Man page |
| getCorrelation | Man page |
| getDefaultFileLocations | Man page |
| getFactorName | Man page |
| getFastaName | Man page |
| getMetaPeaks | Man page |
| getRangeCols | Man page |
| hello | Man page |
| jasparAnalysis | Man page |
| loadFimoData | Man page |
| makeScoreList | Man page |
| outputAllScores | Man page |
| readChip | Man page |
| readDnameth | Man page |
| readDnase | Man page |
| removeHeader | Man page |
| runFimo | Man page |
| run_Uniprobe_scores | Man page |
| run_encode | Man page |
| run_fimo_and_summarize | Man page |
| saveOutput | Man page |
| simpleCap | Man page |
| summarizeEncode | Man page |
| summarizeFactorBook | Man page |
| summarizeJaspar | Man page |
