run_fimo_and_summarize: Runs FactorBook, ENCODE and Jaspar on FIMO
In alice-szeliga/keles-pipeline: A Model to Predict Regulatory and Expression Modulating eQTLs
Description
Runs FactorBook, ENCODE and Jaspar on FIMO
Arguments
refOrAlt:
string, "ref" or "alt"
memeFimoDir:
string,
pwmFiles:
list of strings, locations of PWMs for ENCODE, Factorbook,
and Jaspar'
Value
Null. Saves to disk.
alice-szeliga/keles-pipeline documentation built on May 12, 2019, 5:35 a.m.
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Description
Runs FactorBook, ENCODE and Jaspar on FIMO
Arguments
refOrAlt: |
string, "ref" or "alt" |
memeFimoDir: |
string, |
pwmFiles: |
list of strings, locations of PWMs for ENCODE, Factorbook, and Jaspar' |
Value
Null. Saves to disk.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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