evidenceplot: generating two-dimensional evidence plot
In allenaigit/pathwayko: PathwayKO: An R package for knock-out pathway enrichment analysis
evidenceplot R Documentation
generating two-dimensional evidence plot
Description
It generates two-dimensional evidence plot for methods based on or derived from SPIA
Usage
evidenceplot()
Details
Specifically, this function looks for two columns in raw pathway analysis results:
"pPERT" and "pNDE", to plot the evidence plot.
Reference: Tarca A. L. et al. (2009) A novel signaling pathway impact analysis. Bioinformatics, 25, 75–82.)
allenaigit/pathwayko documentation built on Nov. 23, 2022, 5:43 p.m.
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| evidenceplot | R Documentation |
generating two-dimensional evidence plot
Description
It generates two-dimensional evidence plot for methods based on or derived from SPIA
Usage
evidenceplot()
Details
Specifically, this function looks for two columns in raw pathway analysis results: "pPERT" and "pNDE", to plot the evidence plot. Reference: Tarca A. L. et al. (2009) A novel signaling pathway impact analysis. Bioinformatics, 25, 75–82.)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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