pathwayview: rendering the true positive KO KEGG pathways by the up- and...
In allenaigit/pathwayko: PathwayKO: An R package for knock-out pathway enrichment analysis
pathwayview R Documentation
rendering the true positive KO KEGG pathways by the up- and down-regulated DE genes
Description
It renders the true positive KO KEGG pathways by the up- and down-regulated DE genes,
which contain and are impacted by the KO genes.
Reference: Luo, W. and Brouwer C., Pathview: an R/Bioconductor package for pathway-based data integration
and visualization. Bioinformatics, 2013, 29(14): 1830-1831, doi: 10.1093/bioinformatics/btt285
Usage
pathwayview()
Value
TRUE on success, FALSE otherwise
allenaigit/pathwayko documentation built on Nov. 23, 2022, 5:43 p.m.
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| pathwayview | R Documentation |
rendering the true positive KO KEGG pathways by the up- and down-regulated DE genes
Description
It renders the true positive KO KEGG pathways by the up- and down-regulated DE genes, which contain and are impacted by the KO genes. Reference: Luo, W. and Brouwer C., Pathview: an R/Bioconductor package for pathway-based data integration and visualization. Bioinformatics, 2013, 29(14): 1830-1831, doi: 10.1093/bioinformatics/btt285
Usage
pathwayview()
Value
TRUE on success, FALSE otherwise
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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