Files in alyst/RpsiXML
R interface to PSI-MI 2.5 files
.Rbuildignore
DESCRIPTION
Makefile
NAMESPACE
NEWS
R/AllClasses.R
R/AllGenerics.R
R/AllMethods.R
R/SAXhandlers.R
R/XMLutils.R
R/funcsAnnotation.R
R/graphSpeciesConverter.R
R/hyperGraphs.R
R/misc.R
R/psi25parser.R
R/psimi25Source.R
R/validatePSIMI25.R
inst/TODO
inst/extdata/psi25files/biogrid_200804_test.xml
inst/extdata/psi25files/corum_psimi_small.xml
inst/extdata/psi25files/dip_2008_test.xml
inst/extdata/psi25files/hprd_200709_test.xml
inst/extdata/psi25files/human_stelzl-2005-1_01.xml
inst/extdata/psi25files/human_stelzl-2005-1_02.xml
inst/extdata/psi25files/intact_2008_test.xml
inst/extdata/psi25files/intact_complexSample.xml
inst/extdata/psi25files/matrixdb_20080609.xml
inst/extdata/psi25files/mint_200711_test.xml
inst/extdata/psi25files/mips_2007_test.xml
inst/extdata/schemas/MIF25.xsd
man/BIOGRID.PSIMI25.Rd
man/availableXrefs-methods.Rd
man/availableXrefs.Rd
man/bait.Rd
man/buildPCHypergraph.Rd
man/complexName.Rd
man/complexes.Rd
man/eListHandler.Rd
man/getAbstractByPMID.Rd
man/graphSpeciesConverter.Rd
man/interactionType.Rd
man/interactions.Rd
man/interactorInfo-methods.Rd
man/interactorInfo.Rd
man/interactors.Rd
man/list2Matrix.Rd
man/null2na.Rd
man/numInteractions-methods.Rd
man/parsePsimi25Interaction.Rd
man/psimi25Attribute-class.Rd
man/psimi25Complex-class.Rd
man/psimi25ComplexEntry-class.Rd
man/psimi25Experiment-class.Rd
man/psimi25Graph-class.Rd
man/psimi25Hypergraph-class.Rd
man/psimi25Hypergraph2GraphNEL.Rd
man/psimi25Interaction-class.Rd
man/psimi25InteractionEntry-class.Rd
man/psimi25Interactor-class.Rd
man/psimi25Source-class.Rd
man/psimi25XML2Graph.Rd
man/separateXMLDataByExpt.Rd
man/sourceId-methods.Rd
man/taxId-methods.Rd
man/translateID-methods.Rd
man/translateID.Rd
man/uniprot-methods.Rd
man/uniprot.Rd
man/validatePSIMI25.Rd
tests/psimi25Source_test.R
vignettes/RpsiXML.Rnw
vignettes/RpsiXMLApp.Rnw
vignettes/underscore.sty
