interactors: Get information of interactors of the given object

Description Usage Arguments Value Author(s) See Also Examples

Description

interactors gets the list of interactors stored in the given object. One can also assign a list to replace old interactors.

numInteractors returns the length of interactors.

Usage

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Arguments

x

An object of the subclass of interactorListBase

value

A list of interactors

Value

The getting method returns a list of interactors. The setting method mutates the object. The count method returns the list length as integer.

Author(s)

Jitao David Zhang <[email protected]>, Tony Chiang <[email protected]>

See Also

psimi25InteractionEntry-class, psimi25ComplexEntry-class

Examples

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xmlDir <- system.file("/extdata/psi25files",package="RpsiXML")

hprdxml <- file.path(xmlDir, "hprd_200709_test.xml")
hprdSet <- parsePsimi25Interaction(hprdxml, HPRD.PSIMI25)
interactors(hprdSet)

## Not run:
intactComplexxml <- file.path(xmlDir,"intact_complexSample.xml")
intactComplexSet <- parsePsimi25Complex(intactComplexxml,
INTACT.PSIMI25)

interactors(intactComplexSet)
numInteractors(intactComplexSet)
## End(Not run)

alyst/RpsiXML documentation built on July 10, 2017, 11:46 p.m.