plot_norm_prop: plot_norm_prop

In amyh25/Rsc: Single Cell Helper Functions

plot_norm_prop

Description

Calculate the proportion and normalized proportion of entries represented within a given group

Usage

plot_norm_prop(prop_df, var, norm_var, col_position = "stack")

Arguments

prop_df	proportion data frame, usually the output of calculate_proportion()
var	grouping var (for Seurat metadata, usually clustering)
norm_var	var to normalize against (for Seurat metadata, usually orig.ident)
col_position	position variable in geom_col (default: "stack"). Use ?geom_col to see other options

Details

Example: metadata %>% calculate_proportion(clustering, orig.ident) %>% plot_prop(clustering, orig.ident)

Value

tibble with proportion and normalized proportion

amyh25/Rsc documentation built on Jan. 29, 2024, 7:22 a.m.