findpins: Select features and generate the incidence table.

In ananjysong/SCclust: Single Cell Copy Number Analysis and Clustering

Select features and generate the incidence table.

Description

Select features (called as pins), generate the binary matrix with rows as pins and columns as cells.

Usage

findpins(breakpoint_table, smear_table)

Arguments

breakpoint_table	The breakpoint_table generated by preprocess_segfile.
smear_table	The smear_table generated by findsmears.

Value

A list of three objects. pinmat is the incidence table. pins is the bin location and sign for the selected features (pins).

ananjysong/SCclust documentation built on April 18, 2022, 10:06 p.m.