gc_one: GC normalization.
In ananjysong/SCclust: Single Cell Copy Number Analysis and Clustering
gc_one R Documentation
GC normalization.
Description
Normalize the bin count file to adjust for nonuniformity results from variation in GC content across the genome.
Usage
gc_one(bin_mat, gc)
Arguments
bin_mat
The bin count files of cells. For example, one bin count file for a cell is CJA1023.varbin.20k.txt
gc
The GC content table.
Value
The normalized bin count table based on GC content.
ananjysong/SCclust documentation built on April 18, 2022, 10:06 p.m.
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| gc_one | R Documentation |
GC normalization.
Description
Normalize the bin count file to adjust for nonuniformity results from variation in GC content across the genome.
Usage
gc_one(bin_mat, gc)
Arguments
bin_mat |
The bin count files of cells. For example, one bin count file for a cell is CJA1023.varbin.20k.txt |
gc |
The GC content table. |
Value
The normalized bin count table based on GC content.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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