andreamrau/coseq: Co-Expression Analysis of Sequencing Data

Co-expression analysis for expression profiles arising from high-throughput sequencing data. Feature (e.g., gene) profiles are clustered using adapted transformations and mixture models or a K-means algorithm, and model selection criteria (to choose an appropriate number of clusters) are provided.

Getting started

Package details

AuthorAndrea Rau, Cathy Maugis-Rabusseau, Antoine Godichon-Baggioni
Bioconductor views GeneExpression RNASeq Sequencing Software
MaintainerAndrea Rau <[email protected]>
LicenseGPL (>=3)
Version1.5.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("andreamrau/coseq")
andreamrau/coseq documentation built on Oct. 15, 2018, 1:24 a.m.