compute_module_score: Tailored module score calculation

In andreaskapou/SeuratPipe: Packaging common Seurat analysis tasks

Tailored module score calculation

Description

This function adapts the AddModuleScore Seurat function to compute module scores based on a group of genes of interest.

Usage

compute_module_score(seu, features, name, seed = 1, ...)

Arguments

seu	Seurat object (required).
features	Vector of features (e.g. genes) to compute module score.
name	Name of module score to be stored in metadata slot.
seed	Set a random seed, for reproducibility.
...	Additional parameters passed to Seurat's AddModuleScore.

Value

A ggplot2 object.

Author(s)

C.A.Kapourani [e-mail]

andreaskapou/SeuratPipe documentation built on Nov. 22, 2022, 4:16 p.m.