cut_out_seqs: Cut out sequence lines

Description Usage Arguments

View source: R/qc_functions.R

Description

Given a trimmed and quality filtered fastq, cut out just the sequence lines, write them out, then exit.

Usage

1
cut_out_seqs(trimmed_fastq, temp_dir)

Arguments

trimmed_fastq

path to a trimmed fastq

temp_dir

a character string giving the path to a directory to use for temporary intermediate files


andrewGhazi/malacoda documentation built on Aug. 2, 2020, 12:54 a.m.