API for antagomir/netresponse
Functional Network Analysis
| Global functions | |
|---|---|
| .onAttach | Source code |
| AIC | Source code |
| AICc | Source code |
| BIC | Source code |
| NetResponseModel-class | Man page |
| P.S | Man page |
| P.Sr | Man page |
| P.r.s | Man page |
| P.rS | Man page |
| P.rs.joint | Man page |
| P.rs.joint.individual | Man page |
| P.s.individual | Man page |
| P.s.r | Man page |
| PlotMixture | Man page Source code |
| PlotMixtureBivariate | Man page Source code |
| PlotMixtureMultivariate | Man page Source code |
| PlotMixtureUnivariate | Man page Source code |
| [[,NetResponseModel-method | Man page |
| add.ellipse | Man page Source code |
| bic.mixture | Man page Source code |
| bic.mixture.multivariate | Man page Source code |
| bic.mixture.univariate | Man page Source code |
| bic.select.best.mode | Man page Source code |
| build.mim | Source code |
| centerData | Man page Source code |
| check.matrix | Man page Source code |
| check.network | Man page Source code |
| colVariances | Source code |
| compute.weight | Source code |
| continuous.responses | Man page Source code |
| continuous.responses.single | Source code |
| detect.responses | Man page Source code |
| dna | Man page |
| edge.delta | Source code |
| ellipse | Source code |
| enrichment.list | Source code |
| enrichment.list.factor | Man page Source code |
| enrichment.list.factor.minimal | Man page Source code |
| enrichment.score | Source code |
| factor.responses | Man page Source code |
| factor.responses.minimal | Man page Source code |
| filter.netw | Man page Source code |
| filter.network | Man page Source code |
| find.best.neighbor | Source code |
| find.best.splitting | Source code |
| find.similar.features | Man page Source code |
| free.energy.improved | Source code |
| fsort | Source code |
| generate.toydata | Man page Source code |
| get.dat | Man page |
| get.dat,NetResponseModel-method | Man page |
| get.mis | Man page Source code |
| get.model.parameters | Man page Source code |
| get.subnet | Source code |
| get.subnets | Man page |
| get.subnets,NetResponseModel-method | Man page |
| getqofz | Man page |
| getqofz,NetResponseModel-method | Man page |
| greedy | Source code |
| independent.models | Man page Source code |
| info.criterion | Source code |
| join.subnets | Source code |
| list.responses.continuous.multi | Man page Source code |
| list.responses.continuous.single | Man page Source code |
| list.responses.factor | Man page Source code |
| list.responses.factor.minimal | Man page Source code |
| list.significant.responses | Man page Source code |
| listify.groupings | Man page Source code |
| mixture.model | Man page |
| mk.E.log.q.p.eta | Source code |
| mk.free.energy | Source code |
| mk.hp.posterior | Source code |
| mk.hp.prior | Source code |
| mk.log.lambda | Source code |
| mk.qOFz | Source code |
| model.stats | Man page Source code |
| netresponse | Man page |
| netresponse-package | Man page |
| order.responses | Man page Source code |
| osmo | Man page |
| pick.model.pairs | Man page Source code |
| pick.model.parameters | Man page Source code |
| plotPCA | Man page Source code |
| plot_associations | Man page Source code |
| plot_data | Man page Source code |
| plot_expression | Man page Source code |
| plot_matrix | Man page Source code |
| plot_response | Man page Source code |
| plot_responses | Man page Source code |
| plot_scale | Man page Source code |
| plot_subnet | Man page Source code |
| rand.qOFz | Source code |
| read.sif | Man page Source code |
| remove.negative.edges | Man page Source code |
| response.enrichment | Man page Source code |
| response2sample | Man page Source code |
| retrieve.model | Source code |
| sample2response | Man page Source code |
| set.breaks | Man page Source code |
| show,NetResponseModel-method | Man page |
| softmax | Source code |
| sortqofz | Source code |
| split.qofz | Man page Source code |
| sumlogsumexp | Source code |
| toydata | Man page |
| update.model.pair | Man page Source code |
| updatePosterior | Source code |
| vdp.mixt | Man page Source code |
| vectorize.groupings | Man page Source code |
| write.netresponse.results | Man page Source code |
