read_blast: Read a blast result of the form expected by phylostratr
In arendsee/phylostratr: Analyze phylostratigraphic data
read_blast R Documentation
Read a blast result of the form expected by phylostratr
Description
Read a blast result of the form expected by phylostratr
Usage
read_blast(x, with_taxid = is.null(taxid), col_names = TRUE, taxid = NULL)
Arguments
x
filename
with_taxid
logical: If TRUE, expect the staxid column to be in the table
col_names
logical: col_names argument from readr::read_tsv
taxid
character: NCBI taxonomy ID, only needed if the table does not
have an staxid column.
arendsee/phylostratr documentation built on Dec. 31, 2022, 10:22 a.m.
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| read_blast | R Documentation |
Read a blast result of the form expected by phylostratr
Description
Read a blast result of the form expected by phylostratr
Usage
read_blast(x, with_taxid = is.null(taxid), col_names = TRUE, taxid = NULL)
Arguments
x |
filename |
with_taxid |
logical: If TRUE, expect the staxid column to be in the table |
col_names |
logical: col_names argument from readr::read_tsv |
taxid |
character: NCBI taxonomy ID, only needed if the table does not have an staxid column. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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