set_node_names: If nodes are not named, give them default names

In arendsee/phylostratr: Analyze phylostratigraphic data

If nodes are not named, give them default names

Description

In phylostratr, all nodes in a tree need to be named, since the names are used to merge trees.

Usage

set_node_names(x, ...)

## S3 method for class 'Strata'
set_node_names(x, ...)

## S3 method for class 'phylo'
set_node_names(x, default_names = paste0("n", nodes(x)), ...)

Arguments

x	phylo or Strata object
...	Arguments passed to set_node_names.phylo
default_names	node names to use if they are missing. Must be a vector with a number of elements equal to the number of nodes in the tree.

Value

phylo or Strata object

arendsee/phylostratr documentation built on Dec. 23, 2024, 1:31 p.m.