strata_diamond: author urmi Blast strata using diamond blastp

View source: R/blast.R

strata_diamondR Documentation

author urmi Blast strata using diamond blastp

Description

author urmi Blast strata using diamond blastp

Usage

strata_diamond(strata, makedb_args = list(), blast_args = list())

Arguments

strata

Strata object where the 'faa' vector is included in the data slot

makedb_args

Additional arguments passed to make_diamond_database

blast_args

Additional arguments passed to run_diamond_blastp

Value

named list of phylostrata, where each element is a vector of blast result filenames


arendsee/phylostratr documentation built on Dec. 31, 2022, 10:22 a.m.