acpplot3d.event: Animates the data in the specified acoustic event as images...

In arnejohannesholmin/cpplot3d: 3D-plotting and segmentation of sonar data

Animates the data in the specified acoustic event as images of three dimensional point plot representations using the R package rgl.

Description

Animates the data in the specified acoustic event as images of three dimensional point plot representations using the R package rgl.

Usage

acpplot3d.event(
  imgout = NULL,
  segout = FALSE,
  names_img = "frame",
  fmt = "png",
  info = "",
  ndigits = NULL,
  vessel.pos = FALSE,
  vessel.pos.col = "blue",
  vessel.pos.size = 0.3,
  force = FALSE,
  cores = 1,
  windowRect = c(0, 49, 1680, 1028),
  seq_names = FALSE,
  cex.3d = 3,
  cpplot3d_type,
  event = 1,
  t = 1,
  turns = 10,
  cruise = 2009116,
  TVG = TRUE,
  TVG.exp = 2,
  dir.data = NULL,
  Paout = TRUE,
  exact = FALSE,
  bgns = TRUE,
  pdns = TRUE,
  nrns = TRUE,
  hins = TRUE,
  kern = NULL,
  segpar = NULL,
  pamkpar = list(),
  nsind = 0.75,
  hins_add = 10,
  pdns_scale = 1e-14,
  TOV = 0,
  cal = 1,
  bmmd = NULL,
  breaks = 40,
  col = "combined",
  colpar = list(start = 0, end = 0.8, flip = TRUE),
  clamp = c(0, 1),
  shrink = TRUE,
  null.value = NA,
  white = 1,
  log = TRUE,
  color.bar = "y--",
  color.bar.lwd = 8,
  color.bar.adj = 0,
  color.bar.tadj = 0.1,
  color.bar.noWhite = TRUE,
  color.bar.nticks = 8,
  color.bar.tickw = 0.005,
  color.bar.tickcol = "black",
  db = TRUE,
  voxels.out = FALSE,
  N = 1e+05,
  acca = NULL,
  fun = "mod",
  allert = 1e+08,
  nlim = NULL,
  fact = NULL,
  cols = c("black", "navyblue", "magenta4", "red3", "darkorange2", "yellow"),
  stretch = 1,
  scale.voxels = 1,
  rand.gen = c("unif", "beta", "norm"),
  possample = 1,
  esnm = "MS70",
  var = "vbsc",
  ind = list(-(1:150), NULL),
  range = list(),
  subset = NULL,
  ideal = TRUE,
  seabed = -12000,
  rot = 2,
  compensation = c("pitch", "roll"),
  plot = TRUE,
  cs.xyzlim = "g",
  add = FALSE,
  beamstypes = 1,
  size = cplot3d.size("pow", y = 20, par = 4),
  bottom = FALSE,
  bottom.res = 5,
  bottom.smooth = NULL,
  bottom.col = "topo.col",
  bottom.N = 1e+05,
  bottom.seg = list(sgth = 0.2, misM = 0.001, bwGp = 2, turns = 100),
  adds = NULL,
  xlim = NULL,
  ylim = NULL,
  zlim = NULL,
  view = c("free", "top", "bottom", "south", "west", "north", "east"),
  zoom = 0.7,
  fov = 60,
  school = FALSE,
  schoolcol = "purple",
  schoolsize = 0.3,
  schoolsample = 0.01,
  schoollen = 4,
  schoollwd = 1,
  schooltype = "p",
  schoolnumt = NULL,
  schoolcrop = FALSE,
  plot.seg = FALSE,
  seg.col = "green",
  seg.alpha = 0.2,
  subdivide = 3,
  excl.neg = TRUE,
  object = c("ellipsoid", "cuboid"),
  par = double(3),
  center = c(0, 0, 0),
  angle = 0,
  aspect = "iso",
  nticks = 5,
  origin = 1,
  xlab = "x",
  ylab = "y",
  zlab = "z",
  full.box = FALSE,
  edge.vpos = "",
  line.vpos = 0,
  at.vpos = NULL,
  cex.vpos = 1,
  col.vpos = "blue",
  clock = "bbl",
  cex.clock = 1,
  adj.clock = c(0, 0),
  format.clock = "Ping: indt\nyyyy-mm-dd\nHH:MM:SS.FFF",
  digits.clock = 2,
  lsp.clock = 0.04,
  col.clock = 4,
  sonar.grid = "frame",
  sonar.grid.col = c("orange", "cornflowerblue"),
  sonar.grid.lwd = 1,
  cs.pos = "g",
  cs.view = "g",
  sides = c("tb", "tb"),
  dens = c(200, 100, 100, 1),
  every = Inf,
  global.grid = FALSE,
  global.grid.lwd = 0.5,
  global.grid.lty = 1,
  ...
)

Arguments

imgout	specifies the directory in which to put the image files of the 3D representation of the regenerated points (plotted using the package rgl). If imgout==FALSE, no image files are saved, if imgout==TRUE or imgout==NULL image files are stored in the default directory named "..../sv2pos/acca___/fmt", and if 'imgout' is a character string, a directory named accordingly is created and image files stored. If already existing, the used is asked to confirm overwriting the existing files.
segout	specifies the directory in which to put the segmentation data files. If segout==FALSE, no segmentation files are saved, if segout==TRUE or segout==NULL segmentation files are stored in the default directory named "..../sv2pos/acca___/tsd", and if 'segout' is a character string, a directory named accordingly is created and image files stored. If already existing, the used is asked to confirm overwriting the existing files.
names_img	is a string representing the names of the png files (excluding numbering and the file extension ".png"). As an example names_img="frame" and 100<length(t)<1000 result in the names "frame001.png", "frame002.png", ... .
fmt	is a string representing the format of the image files. Currently supported are "png", "ps", "eps", "tex", "pdf", "svg" and "pgf". If fmt==NULL no images will be saved, only plotted.
info	is a string to be added to the frame and tsd names.
ndigits	is the number of digits in the numbering indexes in the image names and .school file names. If ndigits=5 and 100<length(t)<1000 the resulting names will be "frame00001.png", "frame00002.png", ..., for the default values of 'fmt' and 'names_img'.
vessel.pos	is TRUE if every elapsed vessel position is to be plotted by a single dot on the surface.
vessel.pos.col	is the color of the vessel positions.
vessel.pos.size	is the size of the vessel positions.
force	is FALSE if the user should be aske for permission to overwrite files.
cores	is the number of cores used for parallel processing. If larger than 1, only image files are saved.

arnejohannesholmin/cpplot3d documentation built on April 14, 2024, 11:36 p.m.