hg38_genes: hg38 gene reference positions
In arnevpladsen/CARMA: Calculate CARMA scores
Description
Usage
Format
Source
Examples
Description
Gene annotation file with genomic start and end positions for all genes. The gene annotation data is exctracted from the "Comprehensive gene annotation" GTF file for hg38, release 32 (GRCh38.p13), obtained from the GENCODE website.
Usage
1
Format
This data frame contains the following 5 columns:
chra factor giving the chromosome number
startposa numeric vector giving the hg38 start position of the gene
endposa numeric vector giving the hg38 end position of the gene
gene_ida factor giving the Ensembl gene annotation ID
gene_namea factor giving the gene name
Source
https://www.gencodegenes.org/human/
Examples
1
arnevpladsen/CARMA documentation built on Dec. 19, 2021, 4:39 a.m.
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Description Usage Format Source Examples
Description
Gene annotation file with genomic start and end positions for all genes. The gene annotation data is exctracted from the "Comprehensive gene annotation" GTF file for hg38, release 32 (GRCh38.p13), obtained from the GENCODE website.
Usage
1 |
Format
This data frame contains the following 5 columns:
chra factor giving the chromosome number
startposa numeric vector giving the hg38 start position of the gene
endposa numeric vector giving the hg38 end position of the gene
gene_ida factor giving the Ensembl gene annotation ID
gene_namea factor giving the gene name
Source
https://www.gencodegenes.org/human/
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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