API for aryeelab/sparseHiC
Efficient compression and analysis of Hi-C Data
| Global functions | |
|---|---|
| +,sparseHiCdata,sparseHiCdata-method | Man page |
| +,sparseHiCdata,sparseHiCdatum-method | Man page |
| +,sparseHiCdatum,sparseHiCdata-method | Man page |
| +,sparseHiCdatum,sparseHiCdatum-method | Man page |
| HiCPro2DNAlandscapeR | Man page |
| HiCPro2DNAlandscapeR,ANY-method | Man page |
| IMR90datum1 | Man page |
| combine,sparseHiCdata,sparseHiCdata-method | Man page |
| combine,sparseHiCdata,sparseHiCdatum-method | Man page |
| combine,sparseHiCdatum,sparseHiCdata-method | Man page |
| combine,sparseHiCdatum,sparseHiCdatum-method | Man page |
| computeBoundaryScores | Man page |
| computeBoundaryScores,ANY-method | Man page |
| exportDNAlandscapeR | Man page |
| exportDNAlandscapeR,sparseHiCdatum-method | Man page |
| geneinfo | Man page |
| getChromosome | Man page |
| getChromosome,sparseHiCdatum,character-method | Man page |
| getHiCMatrix | Man page |
| getHiCMatrix,sparseHiCdata-method | Man page |
| getHiCMatrix,sparseHiCdatum-method | Man page |
| getHiCcolor | Man page |
| getHiCcolor,ANY-method | Man page |
| getResolution | Man page |
| getResolution,sparseHiCdatum-method | Man page |
| getSampleFromBucket | Man page |
| getSampleFromBucket,ANY-method | Man page |
| getSamplesFromBucket | Man page |
| getSamplesFromBucket,ANY-method | Man page |
| hESCdata | Man page |
| hESCdatum1 | Man page |
| hESCdatum2 | Man page |
| import.HiCPro | Man page |
| import.HiCPro,ANY-method | Man page |
| import.HiCPro.full | Man page |
| import.HiCPro.full,ANY-method | Man page |
| plotHiC | Man page |
| plotHiC,ANY-method | Man page |
| samplesInBucket | Man page |
| samplesInBucket,character-method | Man page |
| sparseHiC | Man page |
| sparseHiC-package | Man page |
| sparseHiCdata | Man page |
| sparseHiCdata-class | Man page |
| sparseHiCdatum | Man page |
| sparseHiCdatum-class | Man page |
