geneinfo: Human/mouse exon locations
In aryeelab/sparseHiC: Efficient compression and analysis of Hi-C Data
Description
Format
Value
Source
Description
A dataframe used for plotting annotation for human
and mouse. Each loaded .rda has the same variable
called "geneinfo" (so don't co-load these), but
the files differ by an m orh
Format
A GRanges object
- chrom
Chromosomes without "chr"
- start
exon start location
- stop
exon end location
- gene
Gene Name
- score
dummy column there for sushi
- strand
+1 or -1 to indicate side of DNA
...
Value
A data.frame
Source
biomaRt July 2015 stable build
aryeelab/sparseHiC documentation built on May 12, 2019, 3:43 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Format Value Source
Description
A dataframe used for plotting annotation for human and mouse. Each loaded .rda has the same variable called "geneinfo" (so don't co-load these), but the files differ by an m orh
Format
A GRanges object
- chrom
Chromosomes without "chr"
- start
exon start location
- stop
exon end location
- gene
Gene Name
- score
dummy column there for sushi
- strand
+1 or -1 to indicate side of DNA
...
Value
A data.frame
Source
biomaRt July 2015 stable build
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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