GEfilt: GEfilt
In askomics/askoR: askoR - Differential Expresion Analysis using edgeR
GEfilt R Documentation
GEfilt
Description
Filter genes according to cpm threshold value and replicated cpm option value.
Plot different graphes to explore data before and after filtering.
Usage
GEfilt(data_list, parameters)
Arguments
data_list
list contain all data and metadata (DGEList, samples descritions, contrast, design and annotations)
parameters
list that contains all arguments charged in Asko_start
Value
filtered_counts, large DGEList with filtered counts and data descriptions.
Examples
## Not run:
filtered_counts<-GEfilt(data, parameters)
## End(Not run)
askomics/askoR documentation built on Aug. 11, 2024, 11:05 p.m.
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| GEfilt | R Documentation |
GEfilt
Description
Filter genes according to cpm threshold value and replicated cpm option value.
Plot different graphes to explore data before and after filtering.
Usage
GEfilt(data_list, parameters)
Arguments
data_list |
list contain all data and metadata (DGEList, samples descritions, contrast, design and annotations) |
parameters |
list that contains all arguments charged in Asko_start |
Value
filtered_counts, large DGEList with filtered counts and data descriptions.
Examples
## Not run:
filtered_counts<-GEfilt(data, parameters)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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