API for astrolabediagnostics/orloj
Utilities for the Astrolabe Diagnostics platform

Global functions
.auroraScaleFscSsc Source code
.calculateCountPercent Source code
.calculateMeanChannelIntensity Source code
.chooseLevel Source code
.convertChannelsToDesc Source code
.convertHierarchyToDesc Source code
.convertProfileToImmport Source code
.exportImmportStats Source code
.getSubsetChannelStatistics Source code
.getSubsetChannels Source code
.getSubsetChannelsFull Source code
.identifyFcsInstrumentMissingCyt Source code
.immportExportColOrder Source code
.immportExportHeader Source code
.massSuspectValues Source code
.plotJoy Source code
.plotShepard Source code
.removeEqFromDesc Source code
.removeMassFromDesc Source code
.removeSpecialCasesFromDesc Source code
addBackticks Man page Source code
astrolabeDebrisLabels Man page Source code
auroraPreprocess Man page Source code
auroraTransformChannels Man page Source code
beadChannelNames Man page Source code
calculateFcsDigest Man page Source code
citeseqPreprocess Man page Source code
convertFlowFrame Man page Source code
differentialAbundanceAnalysis Man page Source code
experimentCellSubsetChannelStatistics Man page Source code
experimentCellSubsetCounts Man page Source code
experimentCellSubsetMap Man page Source code
experimentLabelingStrategy Man page Source code
experimentMds Man page Source code
experimentQcMetrics Man page
experimentSummary Man page Source code
exportImmport Man page Source code
exportPlot Man page Source code
exportReport Man page Source code
fcsExprs Man page Source code
filenameify Man page Source code
findStandardMassCytometryChannels Man page Source code
flowPreprocess Man page
formatPvalue Man page Source code
getCellCounts Man page Source code
getCellSubsetLevels Man page Source code
getExperimentSampleFeatures Man page Source code
getSampleFilename Man page Source code
getSampleName Man page Source code
identifyFcsInstrument Man page Source code
importCiteseqChannels Man page Source code
importFcsChannels Man page Source code
importFcsFile Man page
isFileCiteseq Man page Source code
isSample Man page Source code
jsDivergence Man page Source code
jsDivergenceMtx Man page Source code
kde2dVec Man page Source code
loadExperiment Man page Source code
loadSample Man page Source code
massFindNonBeadEvents Man page
massPreprocess Man page Source code
massTransformMassChannels Man page Source code
nameVector Man page Source code
plotBarPlot Man page Source code
plotBoxPlot Man page Source code
plotHeatmap Man page Source code
plotHeatmapAggregate Man page Source code
plotScatterPlot Man page Source code
preprocess Man page Source code
reportBeads Man page Source code
reportCellAssignments Man page Source code
reportCellCounts Man page Source code
reportCombineAggregateStatistics Man page Source code
reportDifferentialAbundanceAnalysis Man page Source code
reportMds Man page Source code
reportNonCells Man page Source code
sampleCellSubsetChannelStatistics Man page Source code
sampleCellSubsetCounts Man page Source code
sampleSummary Man page Source code
astrolabediagnostics/orloj documentation built on July 12, 2019, 12:45 a.m.