convertFlowFrame: Convert a FlowCore flow_frame to Astrolabe sample.

Description Usage Arguments Details Value See Also

View source: R/fcs.R

Description

Convert the flow_frame class into orloj's internal FCS list format.

Usage

1
convertFlowFrame(experiment, filename, flow_frame)

Arguments

experiment

An Astrolabe experiment.

filename

The name of the FCS file to import.

flow_frame

FlowCore flow frame.

Details

The orloj FCS list format will accumulate more fields as analyses are applied to it. For example, pre-processing will add a mask to find the non-bead indices. You can use fcsExprs the get the expression data after applying all of the masks that are in the list.

Value

FCS data, in orloj internal FCS list format.

See Also

isSample, fcsExprs


astrolabediagnostics/orloj documentation built on May 20, 2021, 2:17 p.m.