Files in astrolabediagnostics/orloj
Utilities for the Astrolabe Diagnostics platform
DESCRIPTION
LICENSE
NAMESPACE
R/analysis.R
R/citeseq.R
R/experiment.R
R/exportImmport.R
R/fcs.R
R/flow_cytometry.R
R/mass_cytometry.R
R/plotting.R
R/reportBeads.R
R/reportCellAssignments.R
R/reportCellCounts.R
R/reportCombineAggregateStatistics.R
R/reportDifferentialAbundanceAnalysis.R
R/reportDifferentialExpressionAnalysis.R
R/reportMarkerThresholds.R
R/reportMds.R
R/reportNonCells.R
R/sample.R
R/sysdata.rda
R/utilities.R
README.md
examples/CD4+ T Cell.jpg
examples/CD4+ T Cell.jpg.csv
examples/Ce140Di_vs_Eu151Di.jpg
examples/barplot_Granulocyte.jpg
examples/boxplot_Granulocyte.jpg
examples/cell_assignments_Assignment.jpg
examples/cell_assignments_Assignment.jpg.csv
examples/cell_counts_Assignment.jpg
examples/cell_counts_Assignment.jpg.csv
examples/frequency_heatmap.jpg
examples/frequency_heatmap.jpg.csv
examples/volcano.jpg
introduction.md
man/addBackticks.Rd
man/astrolabeDebrisLabels.Rd
man/beadChannelNames.Rd
man/calculateFcsDigest.Rd
man/citeseqPreprocess.Rd
man/convertFlowFrame.Rd
man/differentialAbundanceAnalysis.Rd
man/experimentAssignmentSubsets.Rd
man/experimentCellSubsetChannelStatistics.Rd
man/experimentCellSubsetCounts.Rd
man/experimentCellSubsetMap.Rd
man/experimentDifferentialExpressionAnalysis.Rd
man/experimentLabelingStrategy.Rd
man/experimentMds.Rd
man/experimentSummary.Rd
man/exportImmport.Rd
man/exportPlot.Rd
man/exportReport.Rd
man/fcsExprs.Rd
man/filenameify.Rd
man/findStandardMassCytometryChannels.Rd
man/flowPreprocess.Rd
man/formatPvalue.Rd
man/getExperimentSampleFeatures.Rd
man/getSampleFilename.Rd
man/getSampleName.Rd
man/identifyFcsInstrument.Rd
man/importCiteseqChannels.Rd
man/importFcsChannels.Rd
man/isFileCiteseq.Rd
man/isSample.Rd
man/jsDivergence.Rd
man/jsDivergenceMtx.Rd
man/kde2dVec.Rd
man/loadExperiment.Rd
man/loadSample.Rd
man/massPreprocess.Rd
man/massTransformMassChannels.Rd
man/nameVector.Rd
man/plotBarPlot.Rd
man/plotBoxPlot.Rd
man/plotHeatmap.Rd
man/plotHeatmapAggregate.Rd
man/plotScatterPlot.Rd
man/reportBeads.Rd
man/reportCellAssignments.Rd
man/reportCellCounts.Rd
man/reportCombineAggregateStatistics.Rd
man/reportDifferentialAbundanceAnalysis.Rd
man/reportDifferentialExpressionAnalysis.Rd
man/reportMarkerThresholds.Rd
man/reportMds.Rd
man/reportNonCells.Rd
man/sampleCellSubsetChannelStatistics.Rd
man/sampleCellSubsetCounts.Rd
man/sampleSummary.Rd
