differentialAbundanceAnalysis: Differential abundance analysis.

Description Usage Arguments Value

View source: R/experiment.R

Description

Load the experiment differential abundance analysis, for a given cell subset level.

Usage

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differentialAbundanceAnalysis(
  experiment,
  level = .chooseLevel(experiment),
  convert_ids = TRUE
)

Arguments

experiment

An Astrolabe experiment.

level

Cell subset level, such as "Assignment" or "Profiling".

convert_ids

Whether to convert Astrolabe IDs to feature names.

Value

Differential abundance analysis list.


astrolabediagnostics/orloj documentation built on May 20, 2021, 2:17 p.m.