tests/testthat/_snaps/plotHelpers.md

In athchen/beer: Bayesian Enrichment Estimation in R

Expected read counts and proportion of reads can be calculated

Code
  rc_out
Output
  class: PhIPData 
  dim: 10 10 
  metadata(8): seed a_pi ... b_c fc
  assays(9): counts logfc ... true_theta expected_rc
  rownames(10): 1 2 ... 9 10
  rowData names(2): a_0 b_0
  colnames(10): 1 2 ... 9 10
  colData names(5): group n_init n true_c true_pi
  beads-only name(4): beads

Bayes factors can be calculated

Code
  bf_out
Output
  class: PhIPData 
  dim: 10 10 
  metadata(8): seed a_pi ... b_c fc
  assays(9): counts logfc ... true_theta bayes_factors
  rownames(10): 1 2 ... 9 10
  rowData names(2): a_0 b_0
  colnames(10): 1 2 ... 9 10
  colData names(7): group n_init ... c pi
  beads-only name(4): beads

athchen/beer documentation built on July 2, 2022, 10:35 p.m.